Bioinformatics: Theory and Python Programming

Description

In this course, you will learn :

• Bioinformatics
• Biopython
• Genetics
• Genome Visualization
• BLAST
• Genomic Data Formats
• Bioinformatics-related Python Scripts

Syllabus :

Chapter 1. Fundamentals of Genetics in Context of Bioinformatics

• Biomolecules and Bioinformatics (DNA/RNA, nucleotides)
• Proteins, Functional Nucleotides Sequences
• Enhancers and Silencers

 

Chapter 2. Introduction to Bioinformatics

• Introduction. The Milestone Works. Bioinformatics and Computational Biology
• Bioinformatics' Goals. Minimal Set of Tools

 

Chapter 3. Bioinformatics with GUI

• Bioinformatics with GUI. Basics of Data Retrieved
• Data Formats. Databases. FASTA & PHYLIP
• Seqret conversion. BLAST analysis with GUI

 

Chapter 4. Bioinformatics with Biopython and other Tools

• Getting Ready. BLAST+ locally and remotely
• BLAST+ via Python script. BLAST via Biopython (3 versions of code).
• Genome Visualization via GenomeDiagram library

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